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    AMSG_04869 translation machinery-associated protein 20 [ Thecamonas trahens ATCC 50062 ]

    Gene ID: 25564388, updated on 17-Feb-2024

    Summary

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    Gene symbol
    AMSG_04869
    Gene description
    translation machinery-associated protein 20
    Locus tag
    AMSG_04869
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Thecamonas trahens ATCC 50062 (strain: ATCC 50062, culture-collection: ATCC:50062)
    Lineage
    Eukaryota; Apusozoa; Apusomonadida; Apusomonadidae; Thecamonas
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    Genomic context

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    See AMSG_04869 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_013657661.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene lysophospholipase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_013657661.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in formation of translation preinitiation complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    translation machinery-associated protein 20

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_013657661.1 Reference assembly

      Range
      195523..196290 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013903084.1 → XP_013758538.1  translation machinery-associated protein 20 [Thecamonas trahens ATCC 50062]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L0D8L0
      Conserved Domains (3) summary
      COG2016
      Location:19 → 175
      Tma20; Predicted ribosome-associated RNA-binding protein Tma20, contains PUA domain [Translation, ribosomal structure and biogenesis]
      cl00607
      Location:60 → 171
      PUA; PUA domain
      cl16921
      Location:2 → 78
      eIF2D_N_like; N-terminal domain of eIF2D, malignant T cell-amplified sequence 1 and related proteins
    Nucleotide Protein
    Heading Accession and Version

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