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    LOC25498875 ankyrin repeat and zinc finger domain-containing protein 1 [ Medicago truncatula (barrel medic) ]

    Gene ID: 25498875, updated on 25-Jan-2024

    Summary

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    Gene symbol
    LOC25498875
    Gene description
    ankyrin repeat and zinc finger domain-containing protein 1
    Locus tag
    MtrunA17_Chr7g0246001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC25498875 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 7 NC_053048.1 (34917807..34931744, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 7 NC_016413.2 (28216057..28229998, complement)

    Chromosome 7 - NC_053048.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and zinc finger domain-containing protein 1 Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene fasciclin-like arabinogalactan protein 10 Neighboring gene vacuolar-processing enzyme

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: ankyrin repeat and zinc finger domain-containing protein 1
    Names
    putative ankyrin repeat-containing domain-containing protein
    putative transcription factor C2H2 family

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053048.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      34917807..34931744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013593847.3 → XP_013449301.2  LOW QUALITY PROTEIN: ankyrin repeat and zinc finger domain-containing protein 1

      UniProtKB/TrEMBL
      A0A072U2A1
      Conserved Domains (3) summary
      PHA02876
      Location:317 → 427
      PHA02876; ankyrin repeat protein; Provisional
      sd00020
      Location:56 → 78
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00045
      Location:389 → 417
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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