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    trs23 TRAPP complex subunit Trs23 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540976, updated on 18-Sep-2024

    Summary

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    Official Symbol
    trs23
    Official Full Name
    TRAPP complex subunit Trs23
    Primary source
    PomBase:SPBC3B9.12
    Locus tag
    SPOM_SPBC3B9.12
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See trs23 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003423.3 (4008115..4008829)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene SNARE protein Vti1 Neighboring gene DASH complex subunit Dad4 Neighboring gene cleavage and polyadenylation specificity factor complex subunit Ctf1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ribosomal protein P1 Neighboring gene mitochondrial 54S ribosomal protein mL44

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intra-Golgi vesicle-mediated transport IC
    Inferred by Curator
    more info
    		  
    involved_in intracellular protein transport NAS
    Non-traceable Author Statement
    more info
    		  
    involved_in macroautophagy IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of TRAPP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of TRAPPI protein complex ISO
    Inferred from Sequence Orthology
    more info
    		  
    part_of TRAPPII protein complex ISO
    Inferred from Sequence Orthology
    more info
    		  
    part_of TRAPPIII protein complex ISO
    Inferred from Sequence Orthology
    more info
    		  
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    TRAPP complex subunit Trs23

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      4008115..4008829
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022592.3 → NP_596670.1  TRAPP complex subunit Trs23 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596670.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O43041
      Conserved Domains (1) summary
      COG5122
      Location:1 → 132
      TRS23; Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion]
    Nucleotide Protein
    Heading Accession and Version

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