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    RB195_015883 hypothetical protein [ Necator americanus (New World hookworm) ]

    Gene ID: 25357248, updated on 11-Apr-2024

    Summary

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    Gene symbol
    RB195_015883
    Gene description
    hypothetical protein
    Locus tag
    RB195_015883
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Necator americanus (strain: Aroian, nat-host: Mesocricetus auratus)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Strongyloidea; Ancylostomatidae; Bunostominae; Necator
    Also known as
    Necator_chrV.g20676
    Old locus tag
    NECAME_17222
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    Genomic context

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    See RB195_015883 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_087375.1 (32261093..32263878)

    Chromosome V - NC_087375.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_087375.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cis-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_013306386.1
    • NECATOR_CHRV.G20676.T1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_087375.1 Reference assembly

      Range
      32261093..32263878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013450932.2 → XP_013306386.1  hypothetical protein RB195_015883 [Necator americanus]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W2TR56
      Conserved Domains (1) summary
      cd14944
      Location:8 → 185
      TRAPPC6A_Trs33; Trs33 subunit of the TRAPP complex
    Nucleotide Protein
    Heading Accession and Version

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