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    UMAG_01122 uncharacterized protein [ Mycosarcoma maydis (corn smut) ]

    Gene ID: 23562231, updated on 4-Dec-2024

    Summary

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    Gene symbol
    UMAG_01122
    Gene description
    uncharacterized protein
    Locus tag
    UMAG_01122
    See related
    FungiDB:UMAG_01122; VEuPathDB:UMAG_01122
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mycosarcoma maydis (strain: 521, culture-collection: FGSC:9021, type-material: neotype of Uredo maydis)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Mycosarcoma
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    Genomic context

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    See UMAG_01122 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_026479.1 (945826..948369)

    Chromosome 2 - NC_026479.1Genomic Context describing neighboring genes Neighboring gene CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Neighboring gene putative proteasome regulatory particle lid subunit RPN8 Neighboring gene Elongator subunit IKI3 Neighboring gene cAMP-dependent protein kinase catalytic subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_026479.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis. Kämper J, et al. Nature, 2006 Nov 2. PMID 17080091
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-3' DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_011387075.1
    • related to HCS1 - DNA helicase A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_026479.1 Reference assembly

      Range
      945826..948369
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011388773.1 → XP_011387075.1  uncharacterized protein UMAG_01122 [Mycosarcoma maydis]

      See identical proteins and their annotated locations for XP_011387075.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D1CDP8
      Conserved Domains (4) summary
      TIGR00376
      Location:30 → 840
      TIGR00376; DNA helicase, putative
      pfam13087
      Location:592 → 814
      AAA_12; AAA domain
      pfam13245
      Location:268 → 345
      AAA_19; Part of AAA domain
      pfam16202
      Location:516 → 590
      BLM_N; N-terminal region of Bloom syndrome protein
    Nucleotide Protein
    Heading Accession and Version

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