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    LOC21394466 ethylene-responsive transcription factor RAP2-7 [ Morus notabilis ]

    Gene ID: 21394466, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC21394466
    Gene description
    ethylene-responsive transcription factor RAP2-7
    Locus tag
    L484_011196
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Morus notabilis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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    Genomic context

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    See LOC21394466 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010368035.1 (142328..146342)

    NW_010368035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112094613 Neighboring gene DNA repair protein RAD51 homolog 2 Neighboring gene uncharacterized LOC21394467 Neighboring gene L-ascorbate peroxidase, cytosolic

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010368035 Unplaced Scaffold Reference ASM41409v2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ethylene-responsive transcription factor RAP2-7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM41409v2

    Genomic

    1. NW_010368035.1 Reference ASM41409v2

      Range
      142328..146342
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024176019.1 → XP_024031787.1  ethylene-responsive transcription factor RAP2-7 isoform X1

      Conserved Domains (1) summary
      smart00380
      Location:265 → 328
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs

    2. XM_024176020.1 → XP_024031788.1  ethylene-responsive transcription factor RAP2-7 isoform X2

      Conserved Domains (1) summary
      smart00380
      Location:265 → 313
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
    Nucleotide Protein
    Heading Accession and Version

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