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    HELRODRAFT_81718 hypothetical protein [ Helobdella robusta ]

    Gene ID: 20215976, updated on 25-Jan-2024

    Summary

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    Gene symbol
    HELRODRAFT_81718
    Gene description
    hypothetical protein
    Locus tag
    HELRODRAFT_81718
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Helobdella robusta
    Lineage
    Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella
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    Genomic context

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    See HELRODRAFT_81718 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    7

    NW_008704544.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008704544.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into bilaterian evolution from three spiralian genomes. Simakov O, et al. Nature, 2013 Jan 24. PMID 23254933, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H3K4 methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of histone methyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008704544.1 Reference assembly

      Range
      719166..721222
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009022284.1 → XP_009020532.1  hypothetical protein HELRODRAFT_81718 [Helobdella robusta]

      See identical proteins and their annotated locations for XP_009020532.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      T1G4H8
      Conserved Domains (4) summary
      smart00317
      Location:210 → 329
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
      smart00508
      Location:330 → 346
      PostSET; Cysteine-rich motif following a subset of SET domains
      COG2940
      Location:204 → 346
      SET; SET domain-containing protein (function unknown) [General function prediction only]
      cl02651
      Location:43 → 124
      FYRC; F/Y rich C-terminus
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases