U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    SDRG_04350 hypothetical protein [ Saprolegnia diclina VS20 ]

    Gene ID: 19945077, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SDRG_04350
    Gene description
    hypothetical protein
    Locus tag
    SDRG_04350
    See related
    FungiDB:SDRG_04350; VEuPathDB:SDRG_04350
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Saprolegnia diclina VS20 (strain: VS20, nat-host: Salmo salar)
    Lineage
    Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Saprolegnia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_008246077.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_008246077.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008246077.1 Reference assembly

      Range
      950549..951355
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008610023.1 → XP_008608245.1  hypothetical protein SDRG_04350 [Saprolegnia diclina VS20]

      See identical proteins and their annotated locations for XP_008608245.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      T0S118
      Conserved Domains (3) summary
      cd15843
      Location:143 → 202
      R-SNARE; SNARE motif, subgroup R-SNARE
      pfam00957
      Location:142 → 210
      Synaptobrevin; Synaptobrevin
      pfam13774
      Location:58 → 112
      Longin; Regulated-SNARE-like domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases