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    T22B2.1 RING-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188716, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T22B2.1
    Official Full Name
    RING-type domain-containing protein
    Primary source
    WormBase:WBGene00020665
    Locus tag
    CELE_T22B2.1
    See related
    AllianceGenome:WB:WBGene00020665
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in innate immune response. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T22B2.1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    7
    Sequence:
    Chromosome: X; NC_003284.9 (3926076..3929574)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene CDK5 regulatory subunit-associated protein 3 Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Peptidase M12B domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in innate immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    RING-type domain-containing protein
    NP_508680.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      3926076..3929574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076279.5 → NP_508680.1  RING-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508680.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45195
      Conserved Domains (2) summary
      TIGR02169
      Location:620 → 769
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      pfam13639
      Location:899 → 942
      zf-RING_2; Ring finger domain
    Nucleotide Protein
    Heading Accession and Version

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