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    SERLADRAFT_491680 exoribonuclease, exosome component 4 [ Serpula lacrymans var. lacrymans S7.9 ]

    Gene ID: 18821726, updated on 11-Apr-2024

    Summary

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    Gene symbol
    SERLADRAFT_491680
    Gene description
    exoribonuclease, exosome component 4
    Locus tag
    SERLADRAFT_491680
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Serpula lacrymans var. lacrymans S7.9 (strain: S7.9, variety: lacrymans)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Boletales; Coniophorineae; Serpulaceae; Serpula
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    Genomic context

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    See SERLADRAFT_491680 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_006763296.1Genomic Context describing neighboring genes Neighboring gene glycoside hydrolase family 79 protein Neighboring gene uncharacterized protein Neighboring gene guanine-N7--methyltransferase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006763296.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in U4 snRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nuclear mRNA surveillance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in poly(A)-dependent snoRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in rRNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytoplasmic exosome (RNase complex) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nuclear exosome (RNase complex) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exoribonuclease, exosome component 4
    XP_007319105.1
    • Exoribonuclease (exosome component 4, RRP41)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006763296.1 Reference assembly

      Range
      1178698..1179715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007319043.1 → XP_007319105.1  exoribonuclease, exosome component 4 [Serpula lacrymans var. lacrymans S7.9]

      See identical proteins and their annotated locations for XP_007319105.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F8NXB5
      Conserved Domains (2) summary
      cd11370
      Location:12 → 236
      RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome
      COG0689
      Location:12 → 232
      Rph; Ribonuclease PH [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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