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    LOC18769429 pentatricopeptide repeat-containing protein At1g56690, mitochondrial [ Prunus persica (peach) ]

    Gene ID: 18769429, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC18769429
    Gene description
    pentatricopeptide repeat-containing protein At1g56690, mitochondrial
    Locus tag
    PRUPE_7G064700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prunus persica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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    Genomic context

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    See LOC18769429 in Genome Data Viewer
    Location:
    chromosome: G7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G7 NC_034015.1 (10314700..10318551)

    Chromosome G7 - NC_034015.1Genomic Context describing neighboring genes Neighboring gene GTP-binding protein TypA/BipA homolog Neighboring gene putative B3 domain-containing protein At5g66980 Neighboring gene remorin 4.1 Neighboring gene NAC transcription factor 29

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_034015.1 Chromosome G7 Reference Prunus_persica_NCBIv2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pentatricopeptide repeat-containing protein At1g56690, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Prunus_persica_NCBIv2 Primary Assembly

    Genomic

    1. NC_034015.1 Reference Prunus_persica_NCBIv2 Primary Assembly

      Range
      10314700..10318551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007204106.2 → XP_007204168.2  pentatricopeptide repeat-containing protein At1g56690, mitochondrial

      UniProtKB/TrEMBL
      A0A251N7N0
      Conserved Domains (2) summary
      sd00004
      Location:398 → 425
      PPR; PPR repeat [structural motif]
      cl25449
      Location:20 → 701
      PPR_2; PPR repeat family

    2. XM_020569524.1 → XP_020425113.1  pentatricopeptide repeat-containing protein At1g56690, mitochondrial

      UniProtKB/TrEMBL
      A0A251N7N0
      Conserved Domains (2) summary
      sd00004
      Location:398 → 425
      PPR; PPR repeat [structural motif]
      cl25449
      Location:20 → 701
      PPR_2; PPR repeat family

    3. XM_020569525.1 → XP_020425114.1  pentatricopeptide repeat-containing protein At1g56690, mitochondrial

      UniProtKB/TrEMBL
      A0A251N7N0
      Conserved Domains (2) summary
      sd00004
      Location:398 → 425
      PPR; PPR repeat [structural motif]
      cl25449
      Location:20 → 701
      PPR_2; PPR repeat family
    Nucleotide Protein Strain
    Heading Accession and Version

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