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    LOC18443400 ent-kaurene oxidase 2 [ Amborella trichopoda ]

    Gene ID: 18443400, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC18443400
    Gene description
    ent-kaurene oxidase 2
    Locus tag
    AMTR_s00056p00094740
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Amborella trichopoda
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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    Genomic context

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    See LOC18443400 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006499905.1 (1123591..1131124, complement)

    NW_006499905.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18443398 Neighboring gene monoacylglycerol lipase Neighboring gene lachrymatory-factor synthase Neighboring gene dentin sialophosphoprotein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006499905.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ent-kaurene oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ent-kaurene oxidation to kaurenoic acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in gibberellin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ent-kaurene oxidase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AMTR1.0 Primary Assembly

    Genomic

    1. NW_006499905.1 Reference AMTR1.0 Primary Assembly

      Range
      1123591..1131124 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020673133.1 → XP_020528792.1  ent-kaurene oxidase 2 isoform X2

      Conserved Domains (1) summary
      cl12078
      Location:42 → 449
      p450; Cytochrome P450

    2. XM_006853590.3 → XP_006853652.1  ent-kaurene oxidase 2 isoform X1

      See identical proteins and their annotated locations for XP_006853652.1

      UniProtKB/TrEMBL
      U5CY86
      Conserved Domains (1) summary
      cl12078
      Location:42 → 503
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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