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    LOC18432362 uncharacterized LOC18432362 [ Amborella trichopoda ]

    Gene ID: 18432362, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC18432362
    Gene description
    uncharacterized LOC18432362
    Locus tag
    AMTR_s00077p00122770
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Amborella trichopoda
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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    Genomic context

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    See LOC18432362 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006498122.1 (1632397..1640390, complement)

    NW_006498122.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit F Neighboring gene uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic Neighboring gene 60S ribosomal protein L44 Neighboring gene nuclear-pore anchor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006498122.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of defense response to fungus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC18432362

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AMTR1.0 Primary Assembly

    Genomic

    1. NW_006498122.1 Reference AMTR1.0 Primary Assembly

      Range
      1632397..1640390 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020666092.1 → XP_020521751.1  uncharacterized protein LOC18432362 isoform X2

      Conserved Domains (1) summary
      pfam11331
      Location:569 → 613
      zinc_ribbon_12; Probable zinc-ribbon domain

    2. XM_006842471.3 → XP_006842534.1  uncharacterized protein LOC18432362 isoform X1

      See identical proteins and their annotated locations for XP_006842534.1

      UniProtKB/TrEMBL
      W1P975
      Conserved Domains (1) summary
      pfam11331
      Location:569 → 613
      zinc_ribbon_12; Probable zinc-ribbon domain
    Nucleotide Protein
    Heading Accession and Version

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