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    CTHT_0056420 uncharacterized protein [ Thermochaetoides thermophila DSM 1495 ]

    Gene ID: 18259680, updated on 6-Dec-2024

    Summary

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    Gene symbol
    CTHT_0056420
    Gene description
    uncharacterized protein
    Locus tag
    CTHT_0056420
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Thermochaetoides thermophila DSM 1495 (strain: DSM 1495, variety: thermophilum, culture-collection: DSM:1495, type-material: type material of Chaetomium thermophilum)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermochaetoides
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    Genomic context

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    See CTHT_0056420 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_006383036.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase ubr1-like protein Neighboring gene putative cytochrome protein Neighboring gene putative mitochondrial chaperone protein Neighboring gene mitochondrial 37S ribosomal protein uS11m

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006383036.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Amlacher S, et al. Cell, 2011 Jul 22. PMID 21784248
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exon-exon junction complex disassembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of exon-exon junction complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006383036.1 Reference assembly

      Range
      2390073..2390720
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006695903.1 → XP_006695966.1  uncharacterized protein CTHT_0056420 [Thermochaetoides thermophila DSM 1495]

      See identical proteins and their annotated locations for XP_006695966.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G0SC95
      Conserved Domains (1) summary
      pfam09282
      Location:20 → 46
      Mago-bind; Mago binding
    Nucleotide Protein
    Heading Accession and Version

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