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    LOC18103567 uncharacterized WD repeat-containing protein C2A9.03 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 18103567, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC18103567
    Gene description
    uncharacterized WD repeat-containing protein C2A9.03
    Locus tag
    POPTR_011G168600v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC18103567 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 11 NC_037295.2 (19167703..19172198)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 11 NC_037295.1 (18385279..18389792)

    Chromosome 11 - NC_037295.2Genomic Context describing neighboring genes Neighboring gene GPI-anchored protein LLG1 Neighboring gene pentatricopeptide repeat-containing protein At5g66520-like Neighboring gene photosystem I reaction center subunit V, chloroplastic Neighboring gene high mobility group B protein 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized WD repeat-containing protein C2A9.03

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037295.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      19167703..19172198
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006377943.3 → XP_006378005.1  uncharacterized WD repeat-containing protein C2A9.03

      See identical proteins and their annotated locations for XP_006378005.1

      UniProtKB/TrEMBL
      B9N5K3
      Conserved Domains (2) summary
      sd00039
      Location:278 → 314
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:249 → 425
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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