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    B0001.2 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 178164, updated on 18-Sep-2024

    Summary

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    Official Symbol
    B0001.2
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00007087
    Locus tag
    CELE_B0001.2
    See related
    AllianceGenome:WB:WBGene00007087
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See B0001.2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    11
    Sequence:
    Chromosome: IV; NC_003282.8 (12146481..12150977, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene MABP domain-containing protein Neighboring gene DUF4210 domain-containing protein Neighboring gene Movement protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GTSF-1 is required for formation of a functional RNA-dependent RNA Polymerase complex in Caenorhabditis elegans. Almeida MV, et al. EMBO J, 2018 Jun 15. PMID 29769402, Free PMC Article
    2. Tudor domain ERI-5 tethers an RNA-dependent RNA polymerase to DCR-1 to potentiate endo-RNAi. Thivierge C, et al. Nat Struct Mol Biol, 2011 Dec 18. PMID 22179787, Free PMC Article
    3. Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Duchaine TF, et al. Cell, 2006 Jan 27. PMID 16439208
    4. Functional identification of microRNA-centered complexes in C. elegans. Hebbar S, et al. Sci Rep, 2022 May 3. PMID 35504914, Free PMC Article
    5. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_502308.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12146481..12150977 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069907.4 → NP_502308.2  Uncharacterized protein CELE_B0001.2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502308.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17411
      Conserved Domains (1) summary
      pfam03312
      Location:495 → 619
      DUF272; Protein of unknown function (DUF272)
    Nucleotide Protein
    Heading Accession and Version

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