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    Y41D4A.4 Transmembrane 9 superfamily member [ Caenorhabditis elegans ]

    Gene ID: 176983, updated on 9-Dec-2024

    Summary

    Official Symbol
    Y41D4A.4
    Official Full Name
    Transmembrane 9 superfamily member
    Primary source
    WormBase:WBGene00021506
    Locus tag
    CELE_Y41D4A.4
    See related
    AllianceGenome:WB:WBGene00021506
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein localization to membrane. Predicted to be active in membrane. Is expressed in several structures, including enteric muscle; head; hypodermis; pharynx; and reproductive system. Orthologous to human TM9SF3 (transmembrane 9 superfamily member 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Y41D4A.4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    6
    Sequence:
    Chromosome: IV; NC_003282.8 (1746001..1751459)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene CC domain-containing protein Neighboring gene Protein-tyrosine-phosphatase Neighboring gene Amidase domain-containing protein;Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial Neighboring gene BUB1 N-terminal domain-containing protein Neighboring gene F-box associated domain-containing protein Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein localization to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Transmembrane 9 superfamily member
    NP_001368299.1
    • Confirmed by transcript evidence
    NP_001368300.1
    • Confirmed by transcript evidence
    NP_001368301.1
    • Confirmed by transcript evidence
    NP_001368302.1
    • Confirmed by transcript evidence
    NP_500130.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      1746001..1751459
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067729.6NP_500130.1  Transmembrane 9 superfamily member [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500130.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95Y24
      Conserved Domains (1) summary
      pfam02990
      Location:46537
      EMP70; Endomembrane protein 70
    2. NM_001380061.2NP_001368299.1  Transmembrane 9 superfamily member [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PBU4
      Conserved Domains (1) summary
      pfam02990
      Location:50540
      EMP70; Endomembrane protein 70
    3. NM_001380062.2NP_001368302.1  Transmembrane 9 superfamily member [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PRX8
      Conserved Domains (1) summary
      pfam02990
      Location:47533
      EMP70; Endomembrane protein 70
    4. NM_001380063.1NP_001368300.1  Transmembrane 9 superfamily member [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PC73
      Conserved Domains (1) summary
      pfam02990
      Location:2469
      EMP70; Endomembrane protein 70
    5. NM_001380064.1NP_001368301.1  Transmembrane 9 superfamily member [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PML6