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    kcmf-1 Drought induced 19 protein type zinc-binding domain-containing protein;zf-Di19 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176095, updated on 9-Dec-2024

    Summary

    Official Symbol
    kcmf-1
    Official Full Name
    Drought induced 19 protein type zinc-binding domain-containing protein;zf-Di19 domain-containing protein
    Primary source
    WormBase:WBGene00022785
    Locus tag
    CELE_ZK652.6
    See related
    AllianceGenome:WB:WBGene00022785
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in synaptic signaling. Predicted to be located in nucleus and synapse. Predicted to be active in plasma membrane. Orthologous to human KCMF1 (potassium channel modulatory factor 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See kcmf-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    9
    Sequence:
    Chromosome: III; NC_003281.10 (7829411..7832494)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Eukaryotic translation initiation factor 3 subunit A Neighboring gene Homeobox protein ceh-23 Neighboring gene Uncharacterized protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of cell communication IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of signaling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in synaptic signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Drought induced 19 protein type zinc-binding domain-containing protein;zf-Di19 domain-containing protein
    NP_001023028.2
    • Confirmed by transcript evidence
    NP_001299933.1
    • Confirmed by transcript evidence
    NP_001299934.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      7829411..7832494
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001027857.6NP_001023028.2  zf-Di19 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34664, Q7Z143
      Conserved Domains (2) summary
      cd02338
      Location:1268
      ZZ_PCMF_like; Zinc finger, ZZ type. Zinc finger present in potassium channel modulatory factor (PCMF) 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Human potassium channel ...
      pfam05605
      Location:93130
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    2. NM_001313004.3NP_001299933.1  Drought induced 19 protein type zinc-binding domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34664, Q7Z143
      UniProtKB/TrEMBL
      A0A0K3AS04
      Conserved Domains (1) summary
      pfam05605
      Location:2966
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    3. NM_001313005.3NP_001299934.1  zf-Di19 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUB7

    RNA

    1. NR_132453.1 RNA Sequence

      Status: REVIEWED