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    LOC135153049 uncharacterized LOC135153049 [ Daucus carota subsp. sativus ]

    Gene ID: 135153049, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC135153049
    Gene description
    uncharacterized LOC135153049
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Daucus carota subsp. sativus (sub-species: sativus)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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    Genomic context

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    See LOC135153049 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 5 NC_030385.2 (40626775..40627260)

    Chromosome 5 - NC_030385.2Genomic Context describing neighboring genes Neighboring gene bergaptol O-methyltransferase-like Neighboring gene chalcone synthase 2 Neighboring gene small ribosomal subunit protein uS2-like Neighboring gene uncharacterized LOC108195029 Neighboring gene bergaptol O-methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_030385.2 Chromosome 5 Reference DH1 v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endosomal transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC135153049

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DH1 v3.0 Primary Assembly

    Genomic

    1. NC_030385.2 Reference DH1 v3.0 Primary Assembly

      Range
      40626775..40627260
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064094828.1 → XP_063950898.1  uncharacterized protein LOC135153049

      UniProtKB/TrEMBL
      A0A164ULG0
    Nucleotide Protein
    Heading Accession and Version

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