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    LOC133691433 tubulin beta chain-like [ Populus nigra ]

    Gene ID: 133691433, updated on 8-May-2024

    Summary

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    Gene symbol
    LOC133691433
    Gene description
    tubulin beta chain-like
    See related
    EnsemblRapid:ENSZTXG00000024871
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus nigra
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC133691433 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_01 current ddPopNigr1.1 (GCF_951802175.1) 4 NC_084855.1 (1385246..1388838)

    Chromosome 4 - NC_084855.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA Z161/Z228 Neighboring gene uncharacterized LOC133690880 Neighboring gene uncharacterized LOC133692806 Neighboring gene uncharacterized LOC133690520

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_084855.1 Chromosome 4 Reference ddPopNigr1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubulin beta chain-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_951802175.1-RS_2024_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ddPopNigr1.1

    Genomic

    1. NC_084855.1 Reference ddPopNigr1.1

      Range
      1385246..1388838
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_062111940.1 → XP_061967924.1  tubulin beta chain-like

      Related
      ENSZTXP00000033911.1, ENSZTXT00000037762.1
    Nucleotide Protein
    Heading Accession and Version

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