U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC133340307 proteasome subunit beta type-5-like [ Lethenteron reissneri (Far Eastern brook lamprey) ]

    Gene ID: 133340307, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC133340307
    Gene description
    proteasome subunit beta type-5-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lethenteron reissneri
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Lethenteron
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC133340307 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_12 current ASM1570882v1 (GCF_015708825.1) 9 NC_083787.1 (13287107..13290794)

    Chromosome 9 - NC_083787.1Genomic Context describing neighboring genes Neighboring gene AFG2 interacting ribosome maturation factor Neighboring gene uncharacterized LOC133340302 Neighboring gene proteasome 26S subunit, non-ATPase 7 Neighboring gene uncharacterized LOC133340309

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_083787.1 Chromosome 9 Reference ASM1570882v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables threonine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    proteasome subunit beta type-5-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_015708825.1-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1570882v1 Primary Assembly

    Genomic

    1. NC_083787.1 Reference ASM1570882v1 Primary Assembly

      Range
      13287107..13290794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061548425.1 → XP_061404409.1  proteasome subunit beta type-5-like

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.