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    HLF HLF transcription factor, PAR bZIP family member [ Nyctereutes procyonoides (raccoon dog) ]

    Gene ID: 129517674, updated on 3-Dec-2024

    Summary

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    Gene symbol
    HLF
    Gene description
    HLF transcription factor, PAR bZIP family member
    Locus tag
    NYPRO_LOCUS705
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nyctereutes procyonoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
    Orthologs
    human mouse all
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    Genomic context

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    See HLF in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575020.1 (12251494..12305878)

    NW_026575020.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly protein COX11, mitochondrial Neighboring gene syntaxin binding protein 4 Neighboring gene U4 spliceosomal RNA Neighboring gene monocyte to macrophage differentiation associated Neighboring gene small integral membrane protein 36

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026575020 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hepatic leukemia factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NYPRO_anot_genome Primary Assembly

    Genomic

    1. NW_026575020.1 Reference NYPRO_anot_genome Primary Assembly

      Range
      12251494..12305878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055337625.1 → XP_055193600.1  hepatic leukemia factor isoform X1

      UniProtKB/TrEMBL
      A0A811Y1A8

    2. XM_055337633.1 → XP_055193608.1  hepatic leukemia factor isoform X2

    3. XM_055337643.1 → XP_055193618.1  hepatic leukemia factor isoform X3

    4. XM_055337640.1 → XP_055193615.1  hepatic leukemia factor isoform X3

    5. XM_055337651.1 → XP_055193626.1  hepatic leukemia factor isoform X3

    Nucleotide Protein
    Heading Accession and Version

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