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    LOC127119733 protein farnesyltransferase subunit beta [ Pisum sativum (garden pea) ]

    Gene ID: 127119733, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC127119733
    Gene description
    protein farnesyltransferase subunit beta
    Locus tag
    KIW84_011477
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Pisum sativum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum
    Also known as
    FTB; FTase-beta
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    Genomic context

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    See LOC127119733 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current CAAS_Psat_ZW6_1.0 (GCF_024323335.1) 1 NC_066579.1 (103506481..103512982, complement)

    Chromosome 1 - NC_066579.1Genomic Context describing neighboring genes Neighboring gene protein KINESIN LIGHT CHAIN-RELATED 2 Neighboring gene CASP-like protein N24 Neighboring gene formate dehydrogenase 1, mitochondrial Neighboring gene uncharacterized LOC127094013

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_066579.1 Chromosome 1 Reference CAAS_Psat_ZW6_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein farnesyltransferase in plants. Molecular cloning and expression of a homolog of the beta subunit from the garden pea. Yang Z, et al. Plant Physiol, 1993 Feb. PMID 8278509, Free PMC Article
    2. De novo assembly and characterisation of the field pea transcriptome using RNA-Seq. Sudheesh S, et al. BMC Genomics, 2015 Aug 16. PMID 26275991, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein farnesyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein farnesylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of protein farnesyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein farnesyltransferase subunit beta
    Names
    CAAX farnesyltransferase subunit beta
    Ras proteins prenyltransferase subunit beta
    farnesyl-protein transferase beta-subunit
    XP_050906003.1
    XP_050906009.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001427403.1 → NP_001414332.1  protein farnesyltransferase subunit beta

      Status: VALIDATED

      Source sequence(s)
      GCMF01021312, GEUU01009424, GEZC01084397, L08664
      UniProtKB/Swiss-Prot
      Q04903
      UniProtKB/TrEMBL
      A0A9D5BF03

    RefSeqs of Annotated Genomes: Pisum sativum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Psat_ZW6_1.0

    Genomic

    1. NC_066579.1 Reference CAAS_Psat_ZW6_1.0

      Range
      103506481..103512982 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051050046.1 → XP_050906003.1  protein farnesyltransferase subunit beta isoform X1

      UniProtKB/Swiss-Prot
      Q04903

    2. XM_051050052.1 → XP_050906009.1  protein farnesyltransferase subunit beta isoform X2

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q04903.1 GenPept UniProtKB/Swiss-Prot:Q04903

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases