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    Pls3 plastin 3 [ Marmota monax (woodchuck) ]

    Gene ID: 124076766, updated on 22-Mar-2024

    Summary

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    Gene symbol
    Pls3
    Gene description
    plastin 3
    Locus tag
    K8944_020007539sp01
    See related
    EnsemblRapid:ENSMMXG00000023013
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Marmota monax
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
    Orthologs
    human mouse all
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    Genomic context

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    See Pls3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2023_07 current Marmota_monax_Labrador192_F-V1.1 (GCF_021218885.2) Unplaced Scaffold NW_026694552.1 (13361220..13453397)
    100 previous assembly Marmota_monax_Labrador192_V1.0 (GCF_021218885.1) Unplaced Scaffold NW_025724260.1 (13361235..13453397)

    NW_026694552.1Genomic Context describing neighboring genes Neighboring gene leucine zipper protein 4 Neighboring gene histone H3.3A-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament bundle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actin filament bundle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plastin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_021218885.2-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Marmota_monax_Labrador192_F-V1.1 Primary Assembly

    Genomic

    1. NW_026694552.1 Reference Marmota_monax_Labrador192_F-V1.1 Primary Assembly

      Range
      13361220..13453397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058571664.1 → XP_058427647.1  plastin-3 isoform X1

      Related
      ENSMMXP00000035623.2, ENSMMXT00000039431.2

    2. XM_046420841.2 → XP_046276797.1  plastin-3 isoform X2

      UniProtKB/TrEMBL
      A0A5E4CV40
      Related
      ENSMMXP00000035648.2, ENSMMXT00000039459.2

    3. XM_058571665.1 → XP_058427648.1  plastin-3 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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