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    ARL6 ARF like GTPase 6 [ Mirounga angustirostris (Northern elephant seal) ]

    Gene ID: 123863319, updated on 28-Sep-2024

    Summary

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    Gene symbol
    ARL6
    Gene description
    ARF like GTPase 6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mirounga angustirostris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Mirounga
    Orthologs
    human mouse all
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    Genomic context

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    See ARL6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mMirAng1.0.hap1 (GCF_029215605.1) Unplaced Scaffold NW_026991709.1 (44979436..45024404)
    RS_2023_03 previous assembly ASM2128878v3 (GCF_021288785.2) 14 NC_072369.1 (42059458..42104211)

    NW_026991709.1Genomic Context describing neighboring genes Neighboring gene EPH receptor A6 Neighboring gene U2 spliceosomal RNA Neighboring gene signal recognition particle 9 kDa protein-like Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene crystallin beta-gamma domain containing 3 Neighboring gene ribosomal oxygenase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor-like protein 6
    Names
    ADP ribosylation factor like GTPase 6
    ARL6 interacting reticulophagy regulator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029215605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMirAng1.0.hap1

    Genomic

    1. NW_026991709.1 Reference mMirAng1.0.hap1

      Range
      44979436..45024404
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064580481.1 → XP_064436551.1  ADP-ribosylation factor-like protein 6 isoform X2

    2. XM_064580485.1 → XP_064436555.1  ADP-ribosylation factor-like protein 6 isoform X2

    3. XM_064580500.1 → XP_064436570.1  ADP-ribosylation factor-like protein 6 isoform X3

    4. XM_064580442.1 → XP_064436512.1  ADP-ribosylation factor-like protein 6 isoform X1

    5. XM_064580450.1 → XP_064436520.1  ADP-ribosylation factor-like protein 6 isoform X1

    6. XM_054504134.2 → XP_054360109.1  ADP-ribosylation factor-like protein 6 isoform X3

    7. XM_064580457.1 → XP_064436527.1  ADP-ribosylation factor-like protein 6 isoform X1

    8. XM_064580469.1 → XP_064436539.1  ADP-ribosylation factor-like protein 6 isoform X1

    9. XM_064580501.1 → XP_064436571.1  ADP-ribosylation factor-like protein 6 isoform X3

    10. XM_054504133.2 → XP_054360108.1  ADP-ribosylation factor-like protein 6 isoform X3

    11. XM_054504132.2 → XP_054360107.1  ADP-ribosylation factor-like protein 6 isoform X1

    12. XM_064580505.1 → XP_064436575.1  ADP-ribosylation factor-like protein 6 isoform X4

    13. XM_064580514.1 → XP_064436584.1  ADP-ribosylation factor-like protein 6 isoform X5

    14. XM_054504131.2 → XP_054360106.1  ADP-ribosylation factor-like protein 6 isoform X1

    15. XM_064580522.1 → XP_064436592.1  ADP-ribosylation factor-like protein 6 isoform X6

    16. XM_054504135.2 → XP_054360110.1  ADP-ribosylation factor-like protein 6 isoform X6

    RNA

    1. XR_010408012.1 RNA Sequence

    2. XR_008504983.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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