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    LOC122507871 cyclin-K-like [ Leptopilina heterotoma ]

    Gene ID: 122507871, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC122507871
    Gene description
    cyclin-K-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Leptopilina heterotoma
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Cynipoidea; Figitidae; Eucoilinae; Leptopilina
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    Genomic context

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    See LOC122507871 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current ASM1547642v1 (GCF_015476425.1) Unplaced Scaffold NW_025111114.1 (1230722..1233762)

    NW_025111114.1Genomic Context describing neighboring genes Neighboring gene silk gland factor 1 Neighboring gene calcineurin like EF-hand protein 1 elm Neighboring gene cyclin-K-like Neighboring gene tubulin gamma-1 chain Neighboring gene Proteasome assembly chaperone 1 Neighboring gene tRNA methyltransferase 61

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025111114 Unplaced Scaffold Reference ASM1547642v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription, elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cyclin/CDK positive transcription elongation factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclin-K-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Leptopilina heterotoma Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1547642v1

    Genomic

    1. NW_025111114.1 Reference ASM1547642v1

      Range
      1230722..1233762
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043620830.1 → XP_043476765.1  cyclin-K-like

      Conserved Domains (2) summary
      PLN03209
      Location:267 → 381
      PLN03209; translocon at the inner envelope of chloroplast subunit 62; Provisional
      COG5333
      Location:21 → 197
      CCL1; Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]

    RNA

    1. XR_006302176.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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