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    LOC122299930 transmembrane protein 147-like [ Carya illinoinensis ]

    Gene ID: 122299930, updated on 4-Nov-2022

    Summary

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    Gene symbol
    LOC122299930
    Gene description
    transmembrane protein 147-like
    Locus tag
    CIPAW_16G051900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carya illinoinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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    Genomic context

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    See LOC122299930 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 16 NC_056767.1 (10215694..10219659, complement)

    Chromosome 16 - NC_056767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122299813 Neighboring gene AP-3 complex subunit delta-like Neighboring gene probable transcription factor KAN4 Neighboring gene cytochrome P450 CYP82D47-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056767.1 Chromosome 16 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNA-Seq Analysis of Developing Pecan (Carya illinoinensis) Embryos Reveals Parallel Expression Patterns among Allergen and Lipid Metabolism Genes. Mattison CP, et al. J Agric Food Chem, 2017 Feb 22. PMID 28121438

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    transmembrane protein 147-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.illinoinensisPawnee_v1 Primary Assembly

    Genomic

    1. NC_056767.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

      Range
      10215694..10219659 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043110416.1 → XP_042966350.1  transmembrane protein 147-like

      UniProtKB/TrEMBL
      A0A8T1N4K0
      Conserved Domains (1) summary
      pfam09767
      Location:2 → 161
      DUF2053; Predicted membrane protein (DUF2053)
    Nucleotide Protein
    Heading Accession and Version

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