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    LOC122158038 cytosolic phospholipase A2 epsilon-like [ Centrocercus urophasianus (Greater sage-grouse) ]

    Gene ID: 122158038, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC122158038
    Gene description
    cytosolic phospholipase A2 epsilon-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Centrocercus urophasianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Centrocercus
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    Genomic context

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    See LOC122158038 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current USGS_Curo_1.0 (GCF_019232065.1) Unplaced Scaffold NW_024884586.1 (18572347..18611370, complement)

    NW_024884586.1Genomic Context describing neighboring genes Neighboring gene spectrin beta, non-erythrocytic 5 Neighboring gene EH domain containing 4 Neighboring gene cytosolic phospholipase A2 epsilon-like Neighboring gene cytosolic phospholipase A2 epsilon-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024884586 Unplaced Scaffold Reference USGS_Curo_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipase A2 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycerophospholipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytosolic phospholipase A2 epsilon-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Centrocercus urophasianus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USGS_Curo_1.0

    Genomic

    1. NW_024884586.1 Reference USGS_Curo_1.0

      Range
      18572347..18611370 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042814355.1 → XP_042670289.1  cytosolic phospholipase A2 epsilon-like

      Conserved Domains (2) summary
      cd07201
      Location:402 → 936
      cPLA2_Grp-IVB-IVD-IVE-IVF; Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent
      cd04036
      Location:150 → 268
      C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    Nucleotide Protein
    Heading Accession and Version

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