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    Avpr1a arginine vasopressin receptor 1A [ Dipodomys spectabilis (banner-tailed kangaroo rat) ]

    Gene ID: 122124398, updated on 22-Mar-2024

    Summary

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    Gene symbol
    Avpr1a
    Gene description
    arginine vasopressin receptor 1A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys spectabilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
    Orthologs
    human mouse all
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    Genomic context

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    See Avpr1a in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current ASM1905484v1 (GCF_019054845.1) Unplaced Scaffold NW_024870911.1 (12914090..12919453)

    NW_024870911.1Genomic Context describing neighboring genes Neighboring gene ribitol xylosyltransferase 1 Neighboring gene actin-related protein 2/3 complex subunit 3-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024870911 Unplaced Scaffold Reference ASM1905484v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables vasopressin receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of systemic arterial blood pressure by vasopressin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vasopressin V1a receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dipodomys spectabilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1905484v1

    Genomic

    1. NW_024870911.1 Reference ASM1905484v1

      Range
      12914090..12919453
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042699149.1 → XP_042555083.1  vasopressin V1a receptor

      Conserved Domains (2) summary
      cd15385
      Location:55 → 362
      7tmA_V1aR; vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors
      pfam08983
      Location:375 → 421
      DUF1856; Domain of unknown function (DUF1856)
    Nucleotide Protein
    Heading Accession and Version

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