U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    EFCAB5 EF-hand calcium binding domain 5 [ Cygnus olor (mute swan) ]

    Gene ID: 121058095, updated on 22-Mar-2024

    Summary

    Gene symbol
    EFCAB5
    Gene description
    EF-hand calcium binding domain 5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cygnus olor
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See EFCAB5 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    100 current bCygOlo1.pri.v2 (GCF_009769625.2) 20 NC_049188.1 (7353566..7392642)

    Chromosome 20 - NC_049188.1Genomic Context describing neighboring genes Neighboring gene coronin 6 Neighboring gene slingshot protein phosphatase 2 Neighboring gene nuclear speckle splicing regulatory protein 1 Neighboring gene solute carrier family 6 member 4

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_049188.1 Chromosome 20 Reference bCygOlo1.pri.v2 Primary Assembly

    General protein information

    Preferred Names
    EF-hand calcium-binding domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cygnus olor Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bCygOlo1.pri.v2 Primary Assembly

    Genomic

    1. NC_049188.1 Reference bCygOlo1.pri.v2 Primary Assembly

      Range
      7353566..7392642
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040533167.1XP_040389101.1  EF-hand calcium-binding domain-containing protein 5 isoform X1

    2. XM_040533172.1XP_040389106.1  EF-hand calcium-binding domain-containing protein 5 isoform X4

    3. XM_040533166.1XP_040389100.1  EF-hand calcium-binding domain-containing protein 5 isoform X1

    4. XM_040533168.1XP_040389102.1  EF-hand calcium-binding domain-containing protein 5 isoform X1

    5. XM_040533170.1XP_040389104.1  EF-hand calcium-binding domain-containing protein 5 isoform X2

      Conserved Domains (1) summary
      cl08302
      Location:524562
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    6. XM_040533169.1XP_040389103.1  EF-hand calcium-binding domain-containing protein 5 isoform X1

    7. XM_040533171.1XP_040389105.1  EF-hand calcium-binding domain-containing protein 5 isoform X3

      Conserved Domains (1) summary
      cl08302
      Location:409447
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...