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    LACC1 laccase domain containing 1 [ Mauremys reevesii (Reeves's turtle) ]

    Gene ID: 120396121, updated on 21-Mar-2024

    Summary

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    Gene symbol
    LACC1
    Gene description
    laccase domain containing 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mauremys reevesii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
    Orthologs
    human mouse all
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    Genomic context

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    See LACC1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly LG Location
    100 current ASM1616193v1 (GCF_016161935.1) 1 NC_052623.1 (65865648..65910307, complement)

    Linkage Group 1 - NC_052623.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120395767 Neighboring gene uncharacterized LOC120391654 Neighboring gene coiled-coil domain containing 122 Neighboring gene uncharacterized LOC120370498 Neighboring gene ecto-NOX disulfide-thiol exchanger 1 Neighboring gene uncharacterized LOC120370511

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052623.1 Chromosome 1 Reference ASM1616193v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    purine nucleoside phosphorylase LACC1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1616193v1 Primary Assembly

    Genomic

    1. NC_052623.1 Reference ASM1616193v1 Primary Assembly

      Range
      65865648..65910307 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039521055.1 → XP_039376989.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    2. XM_039521059.1 → XP_039376993.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    3. XM_039521057.1 → XP_039376991.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    4. XM_039521056.1 → XP_039376990.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    5. XM_039521053.1 → XP_039376987.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    6. XM_039521051.1 → XP_039376985.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    7. XM_039521052.1 → XP_039376986.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    8. XM_039521061.1 → XP_039376995.1  purine nucleoside phosphorylase LACC1 isoform X2

      Conserved Domains (1) summary
      pfam02578
      Location:22 → 258
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    9. XM_039521050.1 → XP_039376984.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    10. XM_039521054.1 → XP_039376988.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase

    11. XM_039521058.1 → XP_039376992.1  purine nucleoside phosphorylase LACC1 isoform X1

      Conserved Domains (1) summary
      pfam02578
      Location:200 → 436
      Cu-oxidase_4; Multi-copper polyphenol oxidoreductase laccase
    Nucleotide Protein
    Heading Accession and Version

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