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    LOC119982058 (-)-kolavenyl diphosphate synthase TPS14, chloroplastic [ Tripterygium wilfordii ]

    Gene ID: 119982058, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC119982058
    Gene description
    (-)-kolavenyl diphosphate synthase TPS14, chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tripterygium wilfordii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Celastrales; Celastraceae; Tripterygium
    Also known as
    TPS14; TPS21; TPS28; TwTPS14; TwTPS28
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    Genomic context

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    See LOC119982058 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current ASM1340144v1 (GCF_013401445.1) 17 NC_052248.1 (1783499..1789899)

    Chromosome 17 - NC_052248.1Genomic Context describing neighboring genes Neighboring gene probable inactive patatin-like protein 9 Neighboring gene fatty-acid-binding protein 1 Neighboring gene (-)-kolavenyl diphosphate synthase TPS28, chloroplastic-like Neighboring gene (-)-kolavenyl diphosphate synthase TPS14, chloroplastic-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052248.1 Chromosome 17 Reference ASM1340144v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables terpene synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gibberellin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    (-)-kolavenyl diphosphate synthase TPS14, chloroplastic
    Names
    (-)-kolavenyl diphosphate synthase TPS28, chloroplastic
    Terpene synthase 14
    Terpene synthase 28
    diterpene synthase class II

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tripterygium wilfordii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1340144v1

    Genomic

    1. NC_052248.1 Reference ASM1340144v1

      Range
      1783499..1789899
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038825234.1 → XP_038681162.1  (-)-kolavenyl diphosphate synthase TPS14, chloroplastic

      UniProtKB/Swiss-Prot
      A0A0M5L832
      Conserved Domains (1) summary
      PLN02592
      Location:30 → 815
      PLN02592; ent-copalyl diphosphate synthase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0M4M0T9.1 GenPept UniProtKB/Swiss-Prot:A0A0M4M0T9
    A0A0M5L832.1 GenPept UniProtKB/Swiss-Prot:A0A0M5L832

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