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    RECQL4 RecQ like helicase 4 [ Dermochelys coriacea (leatherback sea turtle) ]

    Gene ID: 119850553, updated on 8-May-2024

    Summary

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    Gene symbol
    RECQL4
    Gene description
    RecQ like helicase 4
    See related
    EnsemblRapid:ENSDCOG00030013952
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dermochelys coriacea
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
    Orthologs
    human mouse all
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    Genomic context

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    See RECQL4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    101 current rDerCor1.pri.v4 (GCF_009764565.3) 2 NC_050069.1 (3730578..3775088, complement)
    100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 2 NC_050069.1 (3730581..3775088, complement)

    Chromosome 2 - NC_050069.1Genomic Context describing neighboring genes Neighboring gene fucolectin-1-like Neighboring gene major facilitator superfamily domain containing 3 Neighboring gene leucine rich repeat containing 14 Neighboring gene uncharacterized LOC119852298 Neighboring gene leucine rich repeat containing 24

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5' DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables four-way junction helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA unwinding involved in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in telomere maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent DNA helicase Q4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rDerCor1.pri.v4

    Genomic

    1. NC_050069.1 Reference rDerCor1.pri.v4

      Range
      3730578..3775088 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038388746.2 → XP_038244674.1  ATP-dependent DNA helicase Q4

      Conserved Domains (3) summary
      smart00343
      Location:573 → 588
      ZnF_C2HC; zinc finger
      COG0514
      Location:682 → 1067
      RecQ; Superfamily II DNA helicase RecQ [Replication, recombination and repair]
      cd22289
      Location:2 → 50
      RecQL4_SLD2_NTD; N-terminal homeodomain-like domain of metazoan RecQ protein-like 4 (RecQL4), fungal DNA replication regulator SLD2 and similar proteins

    2. XM_038388744.2 → XP_038244672.1  ATP-dependent DNA helicase Q4

      Related
      ENSDCOP00030039488.1, ENSDCOT00030041958.1
      Conserved Domains (3) summary
      smart00343
      Location:573 → 588
      ZnF_C2HC; zinc finger
      COG0514
      Location:682 → 1067
      RecQ; Superfamily II DNA helicase RecQ [Replication, recombination and repair]
      cd22289
      Location:2 → 50
      RecQL4_SLD2_NTD; N-terminal homeodomain-like domain of metazoan RecQ protein-like 4 (RecQL4), fungal DNA replication regulator SLD2 and similar proteins

    3. XM_038388745.2 → XP_038244673.1  ATP-dependent DNA helicase Q4

      Related
      ENSDCOP00030039582.1, ENSDCOT00030042061.1
      Conserved Domains (3) summary
      smart00343
      Location:573 → 588
      ZnF_C2HC; zinc finger
      COG0514
      Location:682 → 1067
      RecQ; Superfamily II DNA helicase RecQ [Replication, recombination and repair]
      cd22289
      Location:2 → 50
      RecQL4_SLD2_NTD; N-terminal homeodomain-like domain of metazoan RecQ protein-like 4 (RecQL4), fungal DNA replication regulator SLD2 and similar proteins

    4. XM_038388747.2 → XP_038244675.1  ATP-dependent DNA helicase Q4

      Conserved Domains (3) summary
      smart00343
      Location:573 → 588
      ZnF_C2HC; zinc finger
      COG0514
      Location:682 → 1067
      RecQ; Superfamily II DNA helicase RecQ [Replication, recombination and repair]
      cd22289
      Location:2 → 50
      RecQL4_SLD2_NTD; N-terminal homeodomain-like domain of metazoan RecQ protein-like 4 (RecQL4), fungal DNA replication regulator SLD2 and similar proteins

    RNA

    1. XR_005290937.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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