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    Fife regulating synaptic membrane exocytosis protein fife [ Drosophila subpulchrella ]

    Gene ID: 119555190, updated on 17-May-2024

    Summary

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    Gene symbol
    Fife
    Gene description
    regulating synaptic membrane exocytosis protein fife
    See related
    EnsemblRapid:LOC119555190
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila subpulchrella
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See Fife in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current RU_Dsub_v1.1 (GCF_014743375.2) 3L NC_050612.1 (20653186..20720546, complement)

    Chromosome 3L - NC_050612.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119554750 Neighboring gene snurportin-1 Neighboring gene uncharacterized LOC119555191 Neighboring gene synaptic vesicle glycoprotein 2B Neighboring gene prolyl-tRNA synthetase 2-like protein, mitochondrial Neighboring gene synaptic vesicle 2-related protein Neighboring gene Myocardin-related transcription factor Neighboring gene upstream activation factor subunit spp27 homolog Non2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_050612.1 Chromosome 3L Reference RU_Dsub_v1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane transporter binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion-regulated exocytosis of neurotransmitter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of synaptic plasticity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoskeleton of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in presynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    regulating synaptic membrane exocytosis protein 1; regulating synaptic membrane exocytosis protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila subpulchrella Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RU_Dsub_v1.1

    Genomic

    1. NC_050612.1 Reference RU_Dsub_v1.1

      Range
      20653186..20720546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037866446.1 → XP_037722374.1  regulating synaptic membrane exocytosis protein 1 isoform X1

      Related
      XP_037722374.1, XM_037866446.1
      Conserved Domains (4) summary
      cd04031
      Location:679 → 807
      C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
      cd00992
      Location:519 → 608
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd15751
      Location:158 → 215
      FYVE_BSN_PCLO; FYVE-related domain found in protein bassoon and piccolo
      cl14603
      Location:1199 → 1340
      C2; C2 domain

    2. XM_037866445.1 → XP_037722373.1  regulating synaptic membrane exocytosis protein 1 isoform X1

      Related
      XP_037722373.1, XM_037866445.1
      Conserved Domains (4) summary
      cd04031
      Location:679 → 807
      C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
      cd00992
      Location:519 → 608
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd15751
      Location:158 → 215
      FYVE_BSN_PCLO; FYVE-related domain found in protein bassoon and piccolo
      cl14603
      Location:1199 → 1340
      C2; C2 domain

    3. XM_037866444.1 → XP_037722372.1  regulating synaptic membrane exocytosis protein 1 isoform X1

      Related
      XP_037722372.1, XM_037866444.1
      Conserved Domains (4) summary
      cd04031
      Location:679 → 807
      C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
      cd00992
      Location:519 → 608
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd15751
      Location:158 → 215
      FYVE_BSN_PCLO; FYVE-related domain found in protein bassoon and piccolo
      cl14603
      Location:1199 → 1340
      C2; C2 domain

    4. XM_037866443.1 → XP_037722371.1  regulating synaptic membrane exocytosis protein 1 isoform X1

      Related
      XP_037722371.1, XM_037866443.1
      Conserved Domains (4) summary
      cd04031
      Location:679 → 807
      C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
      cd00992
      Location:519 → 608
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd15751
      Location:158 → 215
      FYVE_BSN_PCLO; FYVE-related domain found in protein bassoon and piccolo
      cl14603
      Location:1199 → 1340
      C2; C2 domain

    5. XM_037866447.1 → XP_037722375.1  regulating synaptic membrane exocytosis protein 2 isoform X2

      Related
      XP_037722375.1, XM_037866447.1
      Conserved Domains (2) summary
      cd04031
      Location:10 → 138
      C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
      cl14603
      Location:530 → 671
      C2; C2 domain

    RNA

    1. XR_005219869.1 RNA Sequence

      Related
      XR_005219869.1
    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases