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    LOC119342226 ubiquitin-NEDD8-like protein RUB2 [ Triticum dicoccoides ]

    Gene ID: 119342226, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC119342226
    Gene description
    ubiquitin-NEDD8-like protein RUB2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Triticum dicoccoides
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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    Genomic context

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    See LOC119342226 in Genome Data Viewer
    Location:
    chromosome: 7B
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current WEW_v2.0 (GCF_002162155.1) 7B NC_041393.1 (52392942..52393602, complement)

    Chromosome 7B - NC_041393.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-NEDD8-like protein RUB2 Neighboring gene uncharacterized LOC119340618 Neighboring gene aberrant root formation protein 4-like Neighboring gene beta-xylosidase/alpha-L-arabinofuranosidase 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041393.1 Chromosome 7B Reference WEW_v2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tag activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in modification-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-NEDD8-like protein RUB2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Triticum dicoccoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference WEW_v2.0

    Genomic

    1. NC_041393.1 Reference WEW_v2.0

      Range
      52392942..52393602 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037614073.1 → XP_037469970.1  ubiquitin-NEDD8-like protein RUB2

      Conserved Domains (2) summary
      cd01803
      Location:1 → 76
      Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
      cd01806
      Location:79 → 152
      Ubl_NEDD8; ubiquitin-like (Ubl) domain found in neural precursor cell expressed developmentally down-regulated protein 8 (NEDD8) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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