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    dohh deoxyhypusine hydroxylase/monooxygenase [ Acanthopagrus latus (yellowfin seabream) ]

    Gene ID: 119029358, updated on 21-Mar-2024

    Summary

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    Gene symbol
    dohh
    Gene description
    deoxyhypusine hydroxylase/monooxygenase
    See related
    EnsemblRapid:ENSALTG00010015295
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acanthopagrus latus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
    Orthologs
    human zebrafish all
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    Genomic context

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    See dohh in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current fAcaLat1.1 (GCF_904848185.1) 11 NC_051049.1 (29136988..29149801, complement)

    Chromosome 11 - NC_051049.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119028057 Neighboring gene radial spoke head component 4A Neighboring gene calcium homeostasis endoplasmic reticulum protein Neighboring gene cadherin-2-like Neighboring gene uncharacterized LOC119028958

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051049.1 Chromosome 11 Reference fAcaLat1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables deoxyhypusine monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-lysine modification to peptidyl-hypusine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    deoxyhypusine hydroxylase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAcaLat1.1 Primary Assembly

    Genomic

    1. NC_051049.1 Reference fAcaLat1.1 Primary Assembly

      Range
      29136988..29149801 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037116155.1 → XP_036972050.1  deoxyhypusine hydroxylase

      Related
      ENSALTP00010041382.1, ENSALTT00010044159.1
      Conserved Domains (1) summary
      COG1413
      Location:39 → 304
      HEAT; HEAT repeat [General function prediction only]

    2. XM_037116156.1 → XP_036972051.1  deoxyhypusine hydroxylase

      Conserved Domains (1) summary
      COG1413
      Location:39 → 304
      HEAT; HEAT repeat [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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