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    klf4 Kruppel-like factor 4 [ Megalops cyprinoides (Indo-Pacific tarpon) ]

    Gene ID: 118778359, updated on 20-Mar-2024

    Summary

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    Gene symbol
    klf4
    Gene description
    Kruppel-like factor 4
    See related
    EnsemblRapid:ENSMCNG00005024094
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Megalops cyprinoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Elopiformes; Megalopidae; Megalops
    Orthologs
    human zebrafish all
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    Genomic context

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    See klf4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current fMegCyp1.pri (GCF_013368585.1) 5 NC_050587.1 (13071051..13074831)

    Chromosome 5 - NC_050587.1Genomic Context describing neighboring genes Neighboring gene desmin Neighboring gene alpha-synuclein-like Neighboring gene RAD23 homolog B, nucleotide excision repair protein Neighboring gene zinc finger protein 462

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_050587.1 Chromosome 5 Reference fMegCyp1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Krueppel-like factor 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Megalops cyprinoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fMegCyp1.pri Primary Assembly

    Genomic

    1. NC_050587.1 Reference fMegCyp1.pri Primary Assembly

      Range
      13071051..13074831
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036529864.1 → XP_036385757.1  Krueppel-like factor 4 isoform X1

      Conserved Domains (4) summary
      sd00017
      Location:364 → 386
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:362 → 386
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:408 → 433
      zf-H2C2_2; Zinc-finger double domain
      cd21582
      Location:7 → 362
      KLF4_N; N-terminal domain of Kruppel-like factor 4

    2. XM_036529865.1 → XP_036385758.1  Krueppel-like factor 4 isoform X2

      Related
      ENSMCNP00005063135.1, ENSMCNT00005064241.1
      Conserved Domains (4) summary
      sd00017
      Location:334 → 356
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:332 → 356
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:378 → 403
      zf-H2C2_2; Zinc-finger double domain
      cd21582
      Location:7 → 332
      KLF4_N; N-terminal domain of Kruppel-like factor 4
    Nucleotide Protein
    Heading Accession and Version

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