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    eRF3 eukaryotic translation release factor 3 [ Rhagoletis pomonella (apple maggot) ]

    Gene ID: 118740602, updated on 15-May-2024

    Summary

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    Gene symbol
    eRF3
    Gene description
    eukaryotic translation release factor 3
    See related
    EnsemblRapid:LOC118740602
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhagoletis pomonella
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Rhagoletis
    Orthologs
    fruit fly all
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    Genomic context

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    See eRF3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Rhpom_1.0 (GCF_013731165.1) Unplaced Scaffold NW_023458560.1 (34472367..34478853, complement)

    NW_023458560.1Genomic Context describing neighboring genes Neighboring gene Organic anion transporting polypeptide 33Ea Neighboring gene peptidyl-tRNA hydrolase ICT1, mitochondrial Neighboring gene serine/arginine-rich splicing factor 2-like Neighboring gene uncharacterized LOC118740615 Neighboring gene serine/arginine-rich splicing factor 2-like Neighboring gene uncharacterized protein C1orf194 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023458560 Unplaced Scaffold Reference Rhpom_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sympatric ecological speciation meets pyrosequencing: sampling the transcriptome of the apple maggot Rhagoletis pomonella. Schwarz D, et al. BMC Genomics, 2009 Dec 27. PMID 20035631, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation release factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of translation release factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic peptide chain release factor GTP-binding subunit ERF3A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rhagoletis pomonella Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rhpom_1.0

    Genomic

    1. NW_023458560.1 Reference Rhpom_1.0

      Range
      34472367..34478853 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036472201.1 → XP_036328094.1  eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1

      Related
      XP_036328094.1, XM_036472201.1
      Conserved Domains (3) summary
      COG5256
      Location:188 → 614
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam03154
      Location:59 → 270
      Atrophin-1; Atrophin-1 family
      pfam07145
      Location:12 → 26
      PAM2; Ataxin-2 C-terminal region

    2. XM_036472202.1 → XP_036328095.1  eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X2

      Related
      XP_036328095.1, XM_036472202.1
      Conserved Domains (1) summary
      COG5256
      Location:81 → 507
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

    3. XM_036472203.1 → XP_036328096.1  eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X3

      Related
      XP_036328096.1, XM_036472203.1
      Conserved Domains (1) summary
      COG5256
      Location:67 → 493
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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