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    Gorasp1 golgi reassembly stacking protein 1 [ Arvicanthis niloticus (Nile rat) ]

    Gene ID: 117693806, updated on 19-Mar-2024

    Summary

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    Gene symbol
    Gorasp1
    Gene description
    golgi reassembly stacking protein 1
    See related
    EnsemblRapid:ENSANLG00005024544
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arvicanthis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
    Orthologs
    human mouse all
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    Genomic context

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    See Gorasp1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current mArvNil1.pat.X (GCF_011762505.1) 21 NC_047678.1 (40189562..40200003, complement)

    Chromosome 21 - NC_047678.1Genomic Context describing neighboring genes Neighboring gene sodium/potassium-transporting ATPase subunit beta-3-like Neighboring gene WD repeat domain 48 Neighboring gene tetratricopeptide repeat domain 21A Neighboring gene cysteine and serine rich nuclear protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047678.1 Chromosome 21 Reference mArvNil1.pat.X

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Golgi reassembly-stacking protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mArvNil1.pat.X

    Genomic

    1. NC_047678.1 Reference mArvNil1.pat.X

      Range
      40189562..40200003 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034484560.1 → XP_034340451.1  Golgi reassembly-stacking protein 1 isoform X1

      Related
      ENSANLP00005030356.1, ENSANLT00005034570.1
      Conserved Domains (2) summary
      pfam04495
      Location:68 → 204
      GRASP55_65; GRASP55/65 PDZ-like domain
      cl00117
      Location:14 → 99
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

    2. XM_034484561.1 → XP_034340452.1  Golgi reassembly-stacking protein 1 isoform X2

      Conserved Domains (2) summary
      pfam04495
      Location:78 → 166
      GRASP55_65; GRASP55/65 PDZ-like domain
      cl00117
      Location:21 → 70
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

    3. XM_034484562.1 → XP_034340453.1  Golgi reassembly-stacking protein 1 isoform X3

      Conserved Domains (1) summary
      pfam04495
      Location:1 → 132
      GRASP55_65; GRASP55/65 PDZ-like domain
    Nucleotide Protein
    Heading Accession and Version

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