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    LOC117460662 complexin-3-like [ Pseudochaenichthys georgianus (South Georgia icefish) ]

    Gene ID: 117460662, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC117460662
    Gene description
    complexin-3-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pseudochaenichthys georgianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys
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    Genomic context

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    See LOC117460662 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current fPseGeo1.1 (GCF_902827115.1) 16 NC_047518.1 (29446232..29447394)

    Chromosome 16 - NC_047518.1Genomic Context describing neighboring genes Neighboring gene meiotic recombination protein REC8 homolog Neighboring gene CDC-like kinase 2b Neighboring gene cytochrome P450 11B, mitochondrial Neighboring gene pyruvate kinase L/R

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_047518.1 Chromosome 16 Reference fPseGeo1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neurotransmitter transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of neurotransmitter secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in terminal bouton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    complexin-3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pseudochaenichthys georgianus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPseGeo1.1

    Genomic

    1. NC_047518.1 Reference fPseGeo1.1

      Range
      29446232..29447394
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034102211.1 → XP_033958102.1  complexin-3-like

      Conserved Domains (1) summary
      pfam05835
      Location:64 → 133
      Synaphin; Synaphin protein
    Nucleotide Protein
    Heading Accession and Version

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