U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    polr3a polymerase (RNA) III (DNA directed) polypeptide A [ Archocentrus centrarchus (flier cichlid) ]

    Gene ID: 115798184, updated on 17-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    polr3a
    Gene description
    polymerase (RNA) III (DNA directed) polypeptide A
    See related
    EnsemblRapid:ENSACEG00005013493
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Archocentrus centrarchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; New World cichlids; Cichlasomatinae; Heroini; Archocentrus
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See polr3a in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    100 current fArcCen1 (GCF_007364275.1) 19 NC_044364.1 (14564640..14587930)

    Chromosome 19 - NC_044364.1Genomic Context describing neighboring genes Neighboring gene zinc finger MIZ domain-containing protein 1-like Neighboring gene peptidylprolyl isomerase Fb Neighboring gene pyroglutamylated RF-amide peptide receptor-like Neighboring gene thymus, brain and testes associated

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_044364.1 Chromosome 19 Reference fArcCen1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA-directed RNA polymerase III subunit RPC1
    Names
    RNA polymerase III subunit A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Archocentrus centrarchus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fArcCen1

    Genomic

    1. NC_044364.1 Reference fArcCen1

      Range
      14564640..14587930
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030754935.1 → XP_030610795.1  DNA-directed RNA polymerase III subunit RPC1

      Related
      ENSACEP00005030936.1, ENSACET00005032079.1
      Conserved Domains (2) summary
      cd02736
      Location:1021 → 1360
      RNAP_III_Rpc1_C; Largest subunit (Rpc1) of Eukaryotic RNA polymerase III (RNAP III), C-terminal domain
      cd02583
      Location:24 → 891
      RNAP_III_RPC1_N; Largest subunit (RPC1) of eukaryotic RNA polymerase III (RNAP III), N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.