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    poc5 POC5 centriolar protein homolog (Chlamydomonas) [ Sparus aurata (gilthead seabream) ]

    Gene ID: 115582477, updated on 17-Mar-2024

    Summary

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    Gene symbol
    poc5
    Gene description
    POC5 centriolar protein homolog (Chlamydomonas)
    See related
    Ensembl:ENSSAUG00010002199
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sparus aurata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
    Orthologs
    human zebrafish all
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    Genomic context

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    See poc5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current fSpaAur1.1 (GCF_900880675.1) 5 NC_044191.1 (13724820..13733880)

    Chromosome 5 - NC_044191.1Genomic Context describing neighboring genes Neighboring gene IQ motif containing GTPase activating protein 2 Neighboring gene coagulation factor II (thrombin) receptor-like 2 Neighboring gene synaptic vesicle glycoprotein 2Ca Neighboring gene ankyrin repeat and death domain containing 1B Neighboring gene polymerase (DNA directed) kappa Neighboring gene ceramide transporter 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044191.1 Chromosome 5 Reference fSpaAur1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centrosomal protein POC5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSpaAur1.1 Primary Assembly

    Genomic

    1. NC_044191.1 Reference fSpaAur1.1 Primary Assembly

      Range
      13724820..13733880
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030418466.1 → XP_030274326.1  centrosomal protein POC5 isoform X1

      UniProtKB/TrEMBL
      A0A671TQI7
      Conserved Domains (1) summary
      TIGR02168
      Location:163 → 363
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. XM_030418469.1 → XP_030274329.1  centrosomal protein POC5 isoform X1

      UniProtKB/TrEMBL
      A0A671TQI7
      Conserved Domains (1) summary
      TIGR02168
      Location:163 → 363
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    3. XM_030418468.1 → XP_030274328.1  centrosomal protein POC5 isoform X1

      UniProtKB/TrEMBL
      A0A671TQI7
      Conserved Domains (1) summary
      TIGR02168
      Location:163 → 363
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    4. XM_030418467.1 → XP_030274327.1  centrosomal protein POC5 isoform X2

      UniProtKB/TrEMBL
      A0A671TQI7, A0A671TU60
      Related
      ENSSAUP00010004247.1, ENSSAUT00010004585.1
      Conserved Domains (1) summary
      TIGR02168
      Location:163 → 363
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version

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