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    TASOR transcription activation suppressor [ Lynx canadensis (Canada lynx) ]

    Gene ID: 115508393, updated on 14-Nov-2024

    Summary

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    Gene symbol
    TASOR
    Gene description
    transcription activation suppressor
    See related
    Ensembl:ENSLCNG00005004918
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lynx canadensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx
    Orthologs
    human mouse all
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    Genomic context

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    See TASOR in Genome Data Viewer
    Location:
    chromosome: A2
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    102 current mLynCan4.pri.v2 (GCF_007474595.2) A2 NC_044304.2 (24661331..24711851, complement)
    101 previous assembly mLynCan4_v1.p (GCF_007474595.1) A2 NC_044304.1 (24661331..24711851, complement)

    Chromosome A2 - NC_044304.2Genomic Context describing neighboring genes Neighboring gene Wnt family member 5A Neighboring gene ELKS/RAB6-interacting/CAST family member 2 Neighboring gene small ubiquitin-related modifier 1-like Neighboring gene coiled-coil domain containing 66 Neighboring gene Rho guanine nucleotide exchange factor 3 Neighboring gene spermatogenesis associated 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of gene expression, epigenetic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to heterochromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of heterochromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein TASOR

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lynx canadensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLynCan4.pri.v2

    Genomic

    1. NC_044304.2 Reference mLynCan4.pri.v2

      Range
      24661331..24711851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030307044.1 → XP_030162904.1  protein TASOR isoform X2

      UniProtKB/TrEMBL
      A0A667GH78
      Related
      ENSLCNP00005007503.1, ENSLCNT00005008419.1
      Conserved Domains (1) summary
      pfam12509
      Location:165 → 309
      DUF3715; Protein of unknown function (DUF3715)

    2. XM_030307045.1 → XP_030162905.1  protein TASOR isoform X3

      UniProtKB/TrEMBL
      A0A667GH78
      Conserved Domains (1) summary
      pfam12509
      Location:165 → 309
      DUF3715; Protein of unknown function (DUF3715)

    3. XM_030307046.1 → XP_030162906.1  protein TASOR isoform X4

      UniProtKB/TrEMBL
      A0A667GH78
      Conserved Domains (1) summary
      pfam12509
      Location:165 → 309
      DUF3715; Protein of unknown function (DUF3715)

    4. XM_030307043.1 → XP_030162903.1  protein TASOR isoform X1

      UniProtKB/TrEMBL
      A0A667GH78
      Conserved Domains (1) summary
      pfam12509
      Location:165 → 309
      DUF3715; Protein of unknown function (DUF3715)

    5. XM_030307048.2 → XP_030162908.1  protein TASOR isoform X6

      UniProtKB/TrEMBL
      A0A667GJA4
      Conserved Domains (1) summary
      pfam12509
      Location:165 → 309
      DUF3715; Protein of unknown function (DUF3715)

    6. XM_030307047.2 → XP_030162907.1  protein TASOR isoform X5

      UniProtKB/TrEMBL
      A0A667FXX9, A0A667GJA4
      Related
      ENSLCNP00005007506.1, ENSLCNT00005008422.1
      Conserved Domains (1) summary
      pfam12509
      Location:165 → 309
      DUF3715; Protein of unknown function (DUF3715)
    Nucleotide Protein
    Heading Accession and Version

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