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    CASKIN2 CASK interacting protein 2 [ Podarcis muralis (Common wall lizard) ]

    Gene ID: 114590609, updated on 15-Mar-2024

    Summary

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    Gene symbol
    CASKIN2
    Gene description
    CASK interacting protein 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Podarcis muralis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
    Orthologs
    human mouse all
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    Genomic context

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    See CASKIN2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current PodMur_1.0 (GCF_004329235.1) 2 NC_041313.1 (33249336..33350657, complement)

    Chromosome 2 - NC_041313.1Genomic Context describing neighboring genes Neighboring gene growth factor receptor-bound protein 2 Neighboring gene transmembrane protein 94 Neighboring gene uncharacterized LOC114590611 Neighboring gene melanin-concentrating hormone receptor 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041313.1 Chromosome 2 Reference PodMur_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    caskin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PodMur_1.0 Primary Assembly

    Genomic

    1. NC_041313.1 Reference PodMur_1.0 Primary Assembly

      Range
      33249336..33350657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028716869.1 → XP_028572702.1  caskin-2 isoform X2

      Conserved Domains (8) summary
      cd09497
      Location:497 → 562
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:563 → 633
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12063
      Location:339 → 400
      SH3_Caskin2; Src Homology 3 domain of CASK interacting protein 2
      PHA03095
      Location:95 → 316
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:204 → 240
      ANK; ANK repeat [structural motif]
      pfam16632
      Location:1421 → 1480
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:927 → 1012
      Caskin-Pro-rich; Proline rich region of Caskin proteins
      pfam12796
      Location:173 → 272
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_028716868.1 → XP_028572701.1  caskin-2 isoform X1

      Conserved Domains (8) summary
      cd09497
      Location:500 → 565
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:566 → 636
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12063
      Location:342 → 403
      SH3_Caskin2; Src Homology 3 domain of CASK interacting protein 2
      PHA03095
      Location:95 → 316
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:204 → 240
      ANK; ANK repeat [structural motif]
      pfam16632
      Location:1424 → 1483
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:930 → 1015
      Caskin-Pro-rich; Proline rich region of Caskin proteins
      pfam12796
      Location:173 → 272
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_028716870.1 → XP_028572703.1  caskin-2 isoform X3

      Conserved Domains (8) summary
      cd09497
      Location:496 → 561
      SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
      cd09498
      Location:562 → 632
      SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
      cd12063
      Location:338 → 399
      SH3_Caskin2; Src Homology 3 domain of CASK interacting protein 2
      PHA03095
      Location:95 → 312
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:204 → 240
      ANK; ANK repeat [structural motif]
      pfam16632
      Location:1420 → 1479
      Caskin-tail; C-terminal region of Caskin
      pfam16907
      Location:926 → 1011
      Caskin-Pro-rich; Proline rich region of Caskin proteins
      pfam12796
      Location:206 → 305
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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