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    PRR5 proline rich 5 [ Chelonia mydas (Green sea turtle) ]

    Gene ID: 114019959, updated on 15-Mar-2024

    Summary

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    Gene symbol
    PRR5
    Gene description
    proline rich 5
    Locus tag
    UY3_08855
    See related
    EnsemblRapid:ENSCMYG00015014356
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonia mydas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
    Orthologs
    human mouse all
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    Genomic context

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    See PRR5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (225300513..225429638, complement)
    102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (225299601..225429803, complement)

    Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 21B Neighboring gene uncharacterized LOC122464016 Neighboring gene Rho GTPase activating protein 8 Neighboring gene shisa like 1 Neighboring gene uncharacterized LOC122464028 Neighboring gene parvin gamma

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in TORC2 signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TORC2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proline-rich protein 5
    Names
    Proline-rich protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rCheMyd1.pri.v2 Primary Assembly

    Genomic

    1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

      Range
      225300513..225429638 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037914682.2 → XP_037770610.1  proline-rich protein 5 isoform X4

      Conserved Domains (1) summary
      pfam08539
      Location:32 → 150
      HbrB; HbrB-like

    2. XM_037914667.2 → XP_037770595.1  proline-rich protein 5 isoform X3

      Conserved Domains (1) summary
      pfam08539
      Location:41 → 159
      HbrB; HbrB-like

    3. XM_037914674.2 → XP_037770602.1  proline-rich protein 5 isoform X4

      Related
      ENSCMYP00015022212.1, ENSCMYT00015026964.1
      Conserved Domains (1) summary
      pfam08539
      Location:32 → 150
      HbrB; HbrB-like

    4. XM_043537882.1 → XP_043393817.1  proline-rich protein 5 isoform X3

      Related
      ENSCMYP00015022209.1, ENSCMYT00015026961.1
      Conserved Domains (1) summary
      pfam08539
      Location:41 → 159
      HbrB; HbrB-like

    5. XM_043537869.1 → XP_043393804.1  proline-rich protein 5 isoform X1

      Related
      ENSCMYP00015022204.1, ENSCMYT00015026955.1

    6. XM_043537880.1 → XP_043393815.1  proline-rich protein 5 isoform X3

      Conserved Domains (1) summary
      pfam08539
      Location:41 → 159
      HbrB; HbrB-like

    7. XM_043537899.1 → XP_043393834.1  proline-rich protein 5 isoform X4

      Conserved Domains (1) summary
      pfam08539
      Location:32 → 150
      HbrB; HbrB-like

    8. XM_043537872.1 → XP_043393807.1  proline-rich protein 5 isoform X2

      Related
      ENSCMYP00015022198.1, ENSCMYT00015026943.1
    Nucleotide Protein
    Heading Accession and Version

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