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    SUPV3L1 Suv3 like RNA helicase [ Zalophus californianus (California sea lion) ]

    Gene ID: 113923788, updated on 15-Mar-2024

    Summary

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    Gene symbol
    SUPV3L1
    Gene description
    Suv3 like RNA helicase
    See related
    EnsemblRapid:ENSZCAG00025021418
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zalophus californianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
    Orthologs
    human mouse all
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    Genomic context

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    See SUPV3L1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    101 current mZalCal1.pri.v2 (GCF_009762305.2) 15 NC_045609.1 (30540976..30567599)
    100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874462.1 (57335163..57361787, complement)

    Chromosome 15 - NC_045609.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like Neighboring gene VPS26, retromer complex component A Neighboring gene U4 spliceosomal RNA Neighboring gene hexokinase domain containing 1 Neighboring gene small EDRK-rich factor 1-like Neighboring gene hexokinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, acting on acid anhydrides IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial RNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial degradosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase SUPV3L1, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mZalCal1.pri.v2 Primary Assembly

    Genomic

    1. NC_045609.1 Reference mZalCal1.pri.v2 Primary Assembly

      Range
      30540976..30567599
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027596903.2 → XP_027452704.1  ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A6J2D961
      Related
      ENSZCAP00025033811.1, ENSZCAT00025038190.1

    2. XM_027596904.2 → XP_027452705.1  ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A6J2D8L4
    Nucleotide Protein
    Heading Accession and Version

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