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    LOC113389285 uncharacterized LOC113389285 [ Ctenocephalides felis (cat flea) ]

    Gene ID: 113389285, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC113389285
    Gene description
    uncharacterized LOC113389285
    See related
    EnsemblRapid:LOC113389285
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ctenocephalides felis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Siphonaptera; Pulicidae; Archaeopsyllinae; Ctenocephalides
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    Genomic context

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    See LOC113389285 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current ASM342690v1 (GCF_003426905.1) Unplaced Scaffold NW_020539727.1 (2161579..2230510, complement)

    NW_020539727.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene mucin-3A-like Neighboring gene uncharacterized LOC113389286 Neighboring gene cytochrome P450 9e2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020539727 Unplaced Scaffold Reference ASM342690v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SH3 domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphotyrosine residue binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables receptor tyrosine kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane raft IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC113389285

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ctenocephalides felis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM342690v1

    Genomic

    1. NW_020539727.1 Reference ASM342690v1

      Range
      2161579..2230510 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026626336.1 → XP_026482121.1  uncharacterized protein LOC113389285

      Related
      XP_026482121.1, XM_026626336.1
      Conserved Domains (4) summary
      cd09920
      Location:68 → 164
      SH2_Cbl-b_TKB; Src homology 2 (SH2) domain found in the Cbl-b TKB domain
      cd14318
      Location:732 → 771
      UBA_Cbl_like; UBA domain found in casitas B-lineage lymphoma (Cbl) proteins
      pfam02761
      Location:10 → 74
      Cbl_N2; CBL proto-oncogene N-terminus, EF hand-like domain
      cd16709
      Location:175 → 240
      RING-HC_Cbl-b; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Cbl-b and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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