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    ptgesl prostaglandin E synthase 2-like [ Astatotilapia calliptera (eastern happy) ]

    Gene ID: 113033564, updated on 15-Mar-2024

    Summary

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    Gene symbol
    ptgesl
    Gene description
    prostaglandin E synthase 2-like
    See related
    Ensembl:ENSACLG00000000568
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astatotilapia calliptera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
    Also known as
    ptges2
    Orthologs
    human zebrafish all
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    Genomic context

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    See ptgesl in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current fAstCal1.2 (GCF_900246225.1) 12 NC_039313.1 (32866426..32874692)

    Chromosome 12 - NC_039313.1Genomic Context describing neighboring genes Neighboring gene derlin-3-like Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit B1a Neighboring gene ral guanine nucleotide dissociation stimulator Neighboring gene outer dense fiber protein 2-like Neighboring gene GLE1 RNA export mediator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039313.1 Chromosome 12 Reference fAstCal1.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables prostaglandin-E synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prostaglandin E synthase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAstCal1.2 Primary Assembly

    Genomic

    1. NC_039313.1 Reference fAstCal1.2 Primary Assembly

      Range
      32866426..32874692
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026187510.1 → XP_026043295.1  prostaglandin E synthase 2

      UniProtKB/TrEMBL
      A0A3P8N7R2
      Related
      ENSACLP00000000787.1, ENSACLT00000000807.1
    Nucleotide Protein
    Heading Accession and Version

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