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    SKOR2 SKI family transcriptional corepressor 2 [ Theropithecus gelada (gelada) ]

    Gene ID: 112611629, updated on 15-Mar-2024

    Summary

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    Gene symbol
    SKOR2
    Gene description
    SKI family transcriptional corepressor 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theropithecus gelada
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
    Orthologs
    human mouse all
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    Genomic context

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    See SKOR2 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Tgel_1.0 (GCF_003255815.1) 18 NC_037686.1 (46780061..46818087)

    Chromosome 18 - NC_037686.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112611269 Neighboring gene ADP/ATP translocase 2 Neighboring gene U6 spliceosomal RNA Neighboring gene immediate early response 3 interacting protein 1 Neighboring gene small nucleolar RNA SNORA44 Neighboring gene haloacid dehalogenase like hydrolase domain containing 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037686.1 Chromosome 18 Reference Tgel_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SMAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SKI family transcriptional corepressor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tgel_1.0 Primary Assembly

    Genomic

    1. NC_037686.1 Reference Tgel_1.0 Primary Assembly

      Range
      46780061..46818087
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025365601.1 → XP_025221386.1  SKI family transcriptional corepressor 2

      Conserved Domains (2) summary
      pfam02437
      Location:39 → 132
      Ski_Sno; SKI/SNO/DAC family
      cl07406
      Location:144 → 236
      c-SKI_SMAD_bind; c-SKI Smad4 binding domain
    Nucleotide Protein
    Heading Accession and Version

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