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    LOC112391993 heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

    Gene ID: 112391993, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC112391993
    Gene description
    heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC112391993 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020180053.1 (4..261)

    NW_020180053.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020180053 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Genomic

    1. NW_020180053.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

      Range
      4..261
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024733547.1 → XP_024589315.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

      UniProtKB/TrEMBL
      A0A341AFC1
      Conserved Domains (1) summary
      cl21551
      Location:1 → 71
      Sulfotransfer_3; Sulfotransferase family
    Nucleotide Protein
    Heading Accession and Version

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